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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8019328 chr14:39890545 G/T LOC647288 chr13:75811890-75814517:- -0.49 -10.13 5.44E-22 Box Plot
THCA rs8019368 chr14:39693944 C/T LOC647288 chr13:75811890-75814517:- 0.31 6.14 1.72E-9 Box Plot
THCA rs80201267 chr2:92040142 G/A ZNF514 chr2:95813075-95831158:- -0.34 -6.5 2.05E-10 Box Plot
THCA rs8020250 chr14:39975927 G/A LOC647288 chr13:75811890-75814517:- -0.45 -7.26 1.56E-12 Box Plot
THCA rs8020472 chr14:39836757 A/T LOC647288 chr13:75811890-75814517:- 0.48 8.75 3.78E-17 Box Plot
THCA rs8020574 chr14:66800074 A/G ATP6V1D chr14:67761088-67826982:- 0.43 7.51 2.92E-13 Box Plot
THCA rs8020596 chr14:39836733 C/T LOC647288 chr13:75811890-75814517:- 0.48 8.75 3.78E-17 Box Plot
THCA rs8022194 chr14:66707190 C/T ATP6V1D chr14:67761088-67826982:- -0.4 -6.81 2.97E-11 Box Plot
THCA rs8022482 chr14:66707109 G/T ATP6V1D chr14:67761088-67826982:- 0.4 6.85 2.34E-11 Box Plot
THCA rs8026376 chr15:31030652 G/T CHRNA7 chr15:32215641-32465219:+ 0.31 7.18 2.6E-12 Box Plot
THCA rs80264589 chr6:26927602 G/A RNF5P1 chr8:38458179-38458718:- 0.66 6.12 2.0E-9 Box Plot
THCA rs80264589 chr6:26927602 G/A ZFP57 chr6:29640169-29648887:- 0.77 7.53 2.55E-13 Box Plot
THCA rs8026481 chr15:30963518 A/C CHRNA7 chr15:32215641-32465219:+ 0.3 7.04 6.89E-12 Box Plot
THCA rs80269926 chr8:11790527 T/C SGK223 chr8:8175258-8244008:- -0.44 -8.16 2.91E-15 Box Plot
THCA rs8027951 chr15:30930500 G/T CHRNA7 chr15:32215641-32465219:+ 0.28 6.72 5.25E-11 Box Plot